We are developing the vertex detector with a fine pixel CCD (FPCCD) for the international linear collider (ILC), whose pixel size is $5 times 5$ $mu$m$^{2}$. To evaluate the performance of the FPCCD vertex detector and optimize its design, development of the software dedicated for the FPCCD is necessary. We, therefore, started to develop the software for FPCCD. In this article, the status of the study is reported.