High--quality single crystals of the heavy fermion superconductors CeCoIn$_5$ and CeIrIn$_5$ have been studied by means of low--temperature Scanning Tunneling Microscopy. Methods were established to facilitate textit{in-situ} sample cleaving. Spectroscopy in CeCoIn$_5$ reveals a gap which persists to above $T_c$, possibly evidencing a precursor state to SC. Atomically resolved topographs show a rearrangement of the atoms at the crystal surface. This modification at the surface might influence the surface properties as detected by tunneling spectroscopy.