We study the effect of a strong magnetic field on the properties of neutron stars with a quark-hadron phase transition. It is shown that the magnetic field prevents the appearance of a quark phase, enhances the leptonic fraction, decreases the baryonic density extension of the mixed phase and stiffens the total equation of state, including both the stellar matter and the magnetic field contributions. Two parametrisations of a density dependent static magnetic field, increasing, respectively, fast and slowly with the density and reaching $2-4times 10^{18}$G in the center of the star, are considered. The compact stars with strong magnetic fields have maximum mass configurations with larger masses and radius and smaller quark fractions. The parametrisation of the magnetic field with density has a strong influence on the star properties.
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