We studied the energy levels of graphene based Andreev billiards consisting of a superconductor region on top of a monolayer graphene sheet. For the case of Andreev retro-reflection we show that the graphene based Andreev billiard can be mapped to the normal metal-superconducting billiards with the same geometry. We also derived a semiclassical quantization rule in graphene based Andreev billiards. The exact and the semiclassically obtained spectrum agree very well both for the case of Andreev retro-reflection and specular Andreev reflection.