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Register a new userMechanochemical action of the dynamin protein
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Dynamin is a ubiquitous GTPase that tubulates lipid bilayers and is implicated in many membrane severing processes in eukaryotic cells. Setting the grounds for a better understanding of this biological function, we develop a generalized hydrodynamics description of the conformational change of large dynamin-membrane tubes taking into account GTP consumption as a free energy source. On observable time scales, dissipation is dominated by an effective dynamin/membrane friction and the deformation field of the tube has a simple diffusive behavior, which could be tested experimentally. A more involved, semi-microscopic model yields complete predictions for the dynamics of the tube and possibly accounts for contradictory experimental results concerning its change of conformation as well as for plectonemic supercoiling.
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We study the liquid-liquid phase separation (LLPS) of a cell-free transcription-translation (TXTL) system. When the TXTL reaction, composed of a large amount of proteins, is concentrated, the uniformly mixed state becomes unstable and membrane-less droplets form spontaneously. This LLPS droplet formation can be induced when the TXTL reaction is enclosed in water-in-oil emulsion droplets in which water evaporates (dehydration) from the surface. As the emulsion droplets shrink, smaller LLPS droplets appear inside the emulsion droplets and coalesce into phase-separated domains that partition the location of proteins. We show that the LLPS in the emulsion droplets can be accelerated by interfacial drift in the outer oil phase. This further provides an experimental platform for studying the interplay between biological reactions and intracellular phase separation.
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