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A distance based test on random trees

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 Added by Georgina Flesia MS
 Publication date 2007
and research's language is English




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In this paper, we address the question of comparison between populations of trees. We study an statistical test based on the distance between empirical mean trees, as an analog of the two sample z statistic for comparing two means. Despite its simplicity, we can report that the test is quite powerful to separate distributions with different means but it does not distinguish between different populations with the same mean, a more complicated test should be applied in that setting. The performance of the test is studied via simulations on Galton-Watson branching processes. We also show an application to a real data problem in genomics.



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Two-sample tests have been one of the most classical topics in statistics with wide application even in cutting edge applications. There are at least two modes of inference used to justify the two-sample tests. One is usual superpopulation inference assuming the units are independent and identically distributed (i.i.d.) samples from some superpopulation; the other is finite population inference that relies on the random assignments of units into different groups. When randomization is actually implemented, the latter has the advantage of avoiding distributional assumptions on the outcomes. In this paper, we will focus on finite population inference for censored outcomes, which has been less explored in the literature. Moreover, we allow the censoring time to depend on treatment assignment, under which exact permutation inference is unachievable. We find that, surprisingly, the usual logrank test can also be justified by randomization. Specifically, under a Bernoulli randomized experiment with non-informative i.i.d. censoring within each treatment arm, the logrank test is asymptotically valid for testing Fishers null hypothesis of no treatment effect on any unit. Moreover, the asymptotic validity of the logrank test does not require any distributional assumption on the potential event times. We further extend the theory to the stratified logrank test, which is useful for randomized blocked designs and when censoring mechanisms vary across strata. In sum, the developed theory for the logrank test from finite population inference supplements its classical theory from usual superpopulation inference, and helps provide a broader justification for the logrank test.
This paper proposes a new statistic to test independence between two high dimensional random vectors ${mathbf{X}}:p_1times1$ and ${mathbf{Y}}:p_2times1$. The proposed statistic is based on the sum of regularized sample canonical correlation coefficients of ${mathbf{X}}$ and ${mathbf{Y}}$. The asymptotic distribution of the statistic under the null hypothesis is established as a corollary of general central limit theorems (CLT) for the linear statistics of classical and regularized sample canonical correlation coefficients when $p_1$ and $p_2$ are both comparable to the sample size $n$. As applications of the developed independence test, various types of dependent structures, such as factor models, ARCH models and a general uncorrelated but dependent case, etc., are investigated by simulations. As an empirical application, cross-sectional dependence of daily stock returns of companies between different sections in the New York Stock Exchange (NYSE) is detected by the proposed test.
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For dendrite graphs from biological experiments on mouses retinal ganglion cells, a paper by Nakatsukasa, Saito and Woei reveals a mysterious phase transition phenomenon in the spectra of the corresponding graph Laplacian matrices. While the bulk of the spectrum can be well understood by structures resembling starlike trees, mysteries about the spikes, that is, isolated eigenvalues outside the bulk spectrum, remain unexplained. In this paper, we bring new insights on these mysteries by considering a class of uniform trees. Exact relationships between the number of such spikes and the number of T-junctions are analyzed in function of the number of vertices separating the T-junctions. Using these theoretic results, predictions are proposed for the number of spikes observed in real-life dendrite graphs. Interestingly enough, these predictions match well the observed numbers of spikes, thus confirm the practical meaningness of our theoretical results.
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We study the problem of estimating the mean of a multivariatedistribution based on independent samples. The main result is the proof of existence of an estimator with a non-asymptotic sub-Gaussian performance for all distributions satisfying some mild moment assumptions.
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The likelihood ratio test is widely used in exploratory factor analysis to assess the model fit and determine the number of latent factors. Despite its popularity and clear statistical rationale, researchers have found that when the dimension of the response data is large compared to the sample size, the classical chi-square approximation of the likelihood ratio test statistic often fails. Theoretically, it has been an open problem when such a phenomenon happens as the dimension of data increases; practically, the effect of high dimensionality is less examined in exploratory factor analysis, and there lacks a clear statistical guideline on the validity of the conventional chi-square approximation. To address this problem, we investigate the failure of the chi-square approximation of the likelihood ratio test in high-dimensional exploratory factor analysis, and derive the necessary and sufficient condition to ensure the validity of the chi-square approximation. The results yield simple quantitative guidelines to check in practice and would also provide useful statistical insights into the practice of exploratory factor analysis.
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