Quantum simulators allow to explore static and dynamical properties of otherwise intractable quantum many-body systems. In many instances, however, it is the read-out that limits such quantum simulations. In this work, we introduce a new paradigm of experimental read-out exploiting coherent non-interacting dynamics in order to extract otherwise inaccessible observables. Specifically, we present a novel tomographic recovery method allowing to indirectly measure second moments of relative density fluctuations in one-dimensional superfluids which until now eluded direct measurements. We achieve this by relating second moments of relative phase fluctuations which are measured at different evolution times through known dynamical equations arising from unitary non-interacting multi-mode dynamics. Applying methods from signal processing we reconstruct the full matrix of second moments, including the relative density fluctuations. We employ the method to investigate equilibrium states, the dynamics of phonon occupation numbers and even to predict recurrences. The method opens a new window for quantum simulations with one-dimensional superfluids, enabling a deeper analysis of their equilibration and thermalization dynamics.
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