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PCMSolver is an open-source library for continuum electrostatic solvation. It can be combined with any quantum chemistry code and requires a minimal interface with the host program, greatly reducing programming effort. As input, PCMSolver needs only the molecular geometry to generate the cavity and the expectation value of the molecular electrostatic potential on the cavity surface. It then returns the solvent polarization back to the host program. The design is powerful and versatile: minimal loss of performance is expected, and a standard single point self-consistent field implementation requires no more than 2 days of work. We provide a brief theoretical overview, followed by two tutorials: one aimed at quantum chemistry program developers wanting to interface their code with PCMSolver, the other aimed at contributors to the library. We finally illustrate past and ongoing work, showing the librarys features, combined with several quantum chemistry programs.
AutoMeKin2021 is an updated version of tsscds2018, a program for the automated discovery of reaction mechanisms (J. Comput. Chem. 2018, 39, 1922-1930). This release features a number of new capabilities: rare-event molecular dynamics simulations to e
Polynomial multiplication is a bottleneck in most of the public-key cryptography protocols, including Elliptic-curve cryptography and several of the post-quantum cryptography algorithms presently being studied. In this paper, we present a library of
Familia is an open-source toolkit for pragmatic topic modeling in industry. Familia abstracts the utilities of topic modeling in industry as two paradigms: semantic representation and semantic matching. Efficient implementations of the two paradigms
Advances in imaging methods such as electron microscopy, tomography and other modalities are enabling high-resolution reconstructions of cellular and organelle geometries. Such advances pave the way for using these geometries for biophysical and math
In this paper, we present an open-source multi-resolution and multi-physics library: SPHinXsys (pronunciation: sfinksis) which is an acronym for underline{S}moothed underline{P}article underline{H}ydrodynamics (SPH) for underline{in}dustrial compleun