We demonstrate the feasibility to generate surrogates by Fourier-based methods for an incomplete data set. This is performed for the case of a CMB analysis, where astrophysical foreground emission, mainly present in the Galactic plane, is a major challenge. The shuffling of the Fourier phases for generating surrogates is now enabled by transforming the spherical harmonics into a new set of basis functions that are orthonormal on the cut sky. The results show that non-Gaussianities and hemispherical asymmetries in the CMB as identified in several former investigations, can still be detected even when the complete Galactic plane (|b| < 30{deg}) is removed. We conclude that the Galactic plane cannot be the dominant source for these anomalies. The results point towards a violation of statistical isotropy.
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