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For graph classification tasks, many methods use a common strategy to aggregate information of vertex neighbors. Although this strategy provides an efficient means of extracting graph topological features, it brings excessive amounts of information that might greatly reduce its accuracy when dealing with large-scale neighborhoods. Learning graphs using paths or walks will not suffer from this difficulty, but many have low utilization of each path or walk, which might engender information loss and high computational costs. To solve this, we propose a graph kernel using a longest common subsequence (LCS kernel) to compute more comprehensive similarity between paths and walks, which resolves substructure isomorphism difficulties. We also combine it with optimal transport theory to extract more in-depth features of graphs. Furthermore, we propose an LCS metric space and apply an adjacent point merge operation to reduce its computational costs. Finally, we demonstrate that our proposed method outperforms many state-of-the-art graph kernel methods.
In this work, we consider a variant of the classical Longest Common Subsequence problem called Doubly-Constrained Longest Common Subsequence (DC-LCS). Given two strings s1 and s2 over an alphabet A, a set C_s of strings, and a function Co from A to N
In this paper, we study edit distance (ED) and longest common subsequence (LCS) in the asymmetric streaming model, introduced by Saks and Seshadhri [SS13]. As an intermediate model between the random access model and the streaming model, this model a
At CPM 2017, Castelli et al. define and study a new variant of the Longest Common Subsequence Problem, termed the Longest Filled Common Subsequence Problem (LFCS). For the LFCS problem, the input consists of two strings $A$ and $B$ and a multiset of
We consider the classic problem of computing the Longest Common Subsequence (LCS) of two strings of length $n$. While a simple quadratic algorithm has been known for the problem for more than 40 years, no faster algorithm has been found despite an ex
The {em longest common subsequence (LCS)} problem is a classic and well-studied problem in computer science. LCS is a central problem in stringology and finds broad applications in text compression, error-detecting codes and biological sequence compa