A nonperturbative determination of the energy-momentum tensor is essential for understanding the physics of strongly coupled systems. The ability of the Wilson flow to eliminate divergent contact terms makes it a practical method for renormalizing the energy-momentum tensor on the lattice. In this paper, we utilize the Wilson flow to define a procedure to renormalize the energy-momentum tensor for a three-dimensional massless scalar field in the adjoint of $SU(N)$ with a $varphi^4$ interaction on the lattice. In this theory the energy-momentum tensor can mix with $varphi^2$ and we present numerical results for the mixing coefficient for the $N=2$ theory.