In this paper we present energy-conserving, mixed discontinuous Galerkin (DG) and continuous Galerkin (CG) schemes for the solution of a broad class of physical systems described by Hamiltonian evolution equations. These systems often arise in fluid mechanics (incompressible Euler equations) and plasma physics (Vlasov--Poisson equations and gyrokinetic equations), for example. The dynamics is described by a distribution function that evolves given a Hamiltonian and a corresponding Poisson bracket operator, with the Hamiltonian itself computed from field equations. Hamiltonian systems have several conserved quantities, including the quadratic invariants of total energy and the $L_2$ norm of the distribution function. For accurate simulations one must ensure that these quadratic invariants are conserved by the discrete scheme. We show that using a discontinuous Galerkin scheme to evolve the distribution function and ensuring that the Hamiltonian lies in its continuous subspace leads to an energy-conserving scheme in the continuous-time limit. Further, the $L_2$ norm is conserved if central fluxes are used to update the distribution function, but decays monotonically when using upwind fluxes. The conservation of density and $L_2$ norm is then used to show that the entropy is a non-decreasing function of time. The proofs shown here apply to any Hamiltonian system, including ones in which the Poisson bracket operator is non-canonical (for example, the gyrokinetic equations). We demonstrate the ability of the scheme to solve the Vlasov--Poisson and incompressible Euler equations in 2D and provide references where we have applied these schemes to solve the much more complex 5D electrostatic and electromagnetic gyrokinetic equations.
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