We use functional renormalization group method to study a three-orbital model for superconducting Sr$_2$RuO$_4$. Although the pairing symmetry is found to be chiral $p$-wave, the atomic spin-orbit coupling induces near-nodes for quasiparticle excitations. Our theory explains a major experimental puzzle between $d$-wave-like feature observed in thermal experiments and the chiral $p$-wave triplet pairing revealed in nuclear-magnetic-resonance and Kerr effect.
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