We investigate the possibility of explaining the enhancement in semileptonic decays of $bar B to D^{(*)} tau bar u$, the anomalies induced by $bto smu^+mu^-$ in $bar Bto (K, K^*, phi)mu^+mu^-$ and violation of lepton universality in $R_K = Br(bar Bto K mu^+mu^-)/Br(bar Bto K e^+e^-)$ within the framework of R-parity violating (RPV) MSSM. Exchange of down type right-handed squark coupled to quarks and leptons yield interactions which are similar to leptoquark induced interactions that have been proposed to explain the $bar B to D^{(*)} tau bar u$ by tree level interactions and $bto s mu^+mu^-$ anomalies by loop induced interactions, simultaneously. However, the Yukawa couplings in such theories have severe constraints from other rare processes in $B$ and $D$ decays. Although this interaction can provide a viable solution to $R(D^{(*)})$ anomaly, we show that with the severe constraint from $bar B to K u bar u$, it is impossible to solve the anomalies in $bto s mu^+mu^-$ process simultaneously.