ﻻ يوجد ملخص باللغة العربية
We derive an invertible transform linking two widely used measures of species diversity: phylogenetic diversity and the expected proportions of segregating (non-constant) sites. We assume a bi-allelic, symmetric, finite site model of substitution. Like the Hadamard transform of Hendy and Penny, the transform can be expressed completely independent of the underlying phylogeny. Our results bridge work on diversity from two quite distinct scientific communities.
Phylogenetic Diversity (PD) is a prominent quantitative measure of the biodiversity of a collection of present-day species (taxa). This measure is based on the evolutionary distance among the species in the collection. Loosely speaking, if $mathcal{T
Phylogenetic diversity indices provide a formal way to apportion evolutionary heritage across species. Two natural diversity indices are Fair Proportion (FP) and Equal Splits (ES). FP is also called evolutionary distinctiveness and, for rooted trees,
Planning for the protection of species often involves difficult choices about which species to prioritize, given constrained resources. One way of prioritizing species is to consider their evolutionary distinctiveness, i.e. their relative evolutionar
In microbial ecology studies, the most commonly used ways of investigating alpha (within-sample) diversity are either to apply count-only measures such as Simpsons index to Operational Taxonomic Unit (OTU) groupings, or to use classical phylogenetic
Rooted phylogenetic networks provide a way to describe species relationships when evolution departs from the simple model of a tree. However, networks inferred from genomic data can be highly tangled, making it difficult to discern the main reticulat