In this letter, we investigate the coherent tunneling process of photons between a defected circular resonator and a waveguide based on the recently developed discrete coordinate scattering methods (L. Zhou et al., Phys. Rev. Lett. 101, 100501 (2008)). We show the detailed microscopic mechanism of the tunneling and present a simple model for defect coupling in the resonator. The Finite-Difference Time-Domain(FDTD) numerical results is explored to illustrate the analysis results.